Cubist Pharmaceuticals

Cubist Pharmaceuticals Reports GAAP Diluted Net Income of $1.82 Per Share in Fourth Quarter 2008 and GAAP Diluted Net Income of $2.56 Per Share for Full Year 2008

January 23, 2009
Reversal of Cubist's Valuation Allowance for Deferred Tax Assets Benefits Tax Expense by Approximately $127.8 Million 2008 Non-GAAP Diluted Net Income of $1.86 Per Share Earnings Conference Call & Webcast Today (With Slides) at 5:00 p.m. ET
LEXINGTON, MA, January 22, 2009 -- Cubist Pharmaceuticals, Inc. (NASDAQ: CBST) today reported results for the fourth quarter and year ended December 31, 2008. Total net revenues for the fourth quarter of 2008 increased 53% to $131.2 million from $85.6 million in the fourth quarter of 2007. This increase was attributable primarily to Cubist's net sales of CUBICIN(R) (daptomycin for injection) in the United States, which increased 43% to $120.1 million in the fourth quarter of 2008 from $83.9 million in the fourth quarter of 2007.

For the year ended December 31, 2008, total net revenues increased 47% to $433.6 million from $294.6 million for the year ended December 31, 2007. This increase in revenues was primarily attributable to Cubist's net sales of CUBICIN in the United States, which increased 45% to $414.7 million for the year ended December 31, 2008, from $285.1 million for the year ended December 31, 2007. Full year 2008 international net product revenues were $7.4 million, which represents an increase of $2.1 million from full year 2007 international product revenues. Additionally, the full year 2008 total net revenues includes $9.4 million of service revenue relating to Cubist's exclusive agreement with AstraZeneca to sell and provide other support in the United States for MERREM(R) I.V. (meropenem for injection).

Net income for the fourth quarter ended December 31, 2008, on a GAAP basis, was $123.0 million, or $2.15 and $1.82 per basic and diluted share, respectively, as compared to $8.0 million, or $0.14 per basic and diluted share, for the fourth quarter ended December 31, 2007. Included in fourth quarter 2008 results is a tax benefit related to a reversal of Cubist's valuation allowance for deferred tax assets, which resulted in a benefit to tax expense of approximately $127.8 million. Also included in the results for the fourth quarter of 2008 is an other-than-temporary impairment charge of $49.2 million related to our investment in auction rate securities. Cubist's non-GAAP net income for the fourth quarter ended December 31, 2008, excluding the tax benefit and the other-than-temporary impairment charge as well as $3.0 million of stock-compensation expense, was $47.4 million, or $0.83 and $0.71 per basic and diluted share, respectively.

Net income for the year ended December 31, 2008, on a GAAP basis, was $169.8 million, or $3.00 and $2.56 per basic and diluted share, respectively, as compared to net income of $48.1 million, or $0.87 and $0.83 per basic and diluted share, respectively, for the year ended December 31, 2007. GAAP net income for full year 2008 includes $11.8 million of stock-based compensation expense, $2.3 million of assets disposed of in the first quarter of 2008 to build new laboratory space at 65 Hayden Avenue, and $17.5 million of expense related to upfront and milestone payments for the 2008 in-licensing from Dyax Corporation of ecallantide for surgical indications. In addition, included in full year 2008 results is both an other-than-temporary impairment charge of $49.2 million related to our investment in auction rate securities and a tax benefit of $127.8 million related to the reversal of Cubist's valuation allowance for deferred tax assets. Non-GAAP net income for the year ended December 31, 2008, excluding the tax benefit and charges mentioned above, was $122.9 million, or $2.17 and $1.86 per basic and diluted share, respectively.

As of December 31, 2008, Cubist had $417.9 million in cash, cash equivalents and long-term investments. The total number of Cubist's common shares outstanding as of December 31, 2008, was 57,430,200.

Use of Non-GAAP Financial Measures

Cubist uses non-GAAP net income and non-GAAP net income per share data to improve its analysis of operational results and trends. Cubist's management also uses these non-GAAP figures to make financial and operational decisions as these numbers exclude non-operational activities and because management believes these measures are useful to investors because they provide greater transparency regarding Cubist's operating performance. These measures should not be considered an alternative to measurements required by GAAP, such as net income and net income per share, and should not be considered measures of our liquidity. In addition, these non-GAAP measures are unlikely to be comparable with non-GAAP information provided by other companies. A reconciliation between non-GAAP financial measures and GAAP financial measures are included in the tables accompanying this press release after the unaudited condensed consolidated financial statements.

************CONFERENCE CALL & WEBCAST INFORMATION*************

Cubist will host a conference call and live audio webcast to discuss its fourth quarter andfull year 2008 financial results, business activities and financial outlook.

WHEN: Thursday, January 22, 2009 at 5:00 p.m. ET

LIVE DOMESTIC & CANADA CALL-IN: 877-407-0778LIVE INTERNATIONAL CALL-IN: 201-689-8565

24-HOUR REPLAY DOMESTIC & CANADA: 877-660-685324-HOUR REPLAY INTERNATIONAL: 201-612-7415REPLAY PASSCODES (BOTH REQUIRED FOR PLAYBACK):ACCOUNT #: 286 , CONFERENCE ID #: 302882

CALL WILL ALSO BE BROADCAST LIVE, LISTEN ONLY, VIA THE WEB AT:www.cubist.com

Replay will be available for 30 days at www.cubist.com

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About Cubist

Cubist Pharmaceuticals, Inc. is a biopharmaceutical company focused on the research, development, and commercialization of pharmaceutical products that address unmet medical needs in the acute care environment. In the U.S., Cubist markets CUBICIN(R) (daptomycin for injection), the first antibiotic in a new class of anti-infectives called lipopeptides. Cubist has entered into an agreement with AstraZeneca to promote their established broad spectrum antibiotic, MERREM I.V.(R) (meropenem for injection) in U.S. hospitals. The Cubist product pipeline includes ecallantide, a recombinant human protein in Phase 2 clinical trials for the prevention of blood loss during cardiothoracic surgery; two programs with recently submitted INDs that address unmet medical needs to treat Gram-negative infections and CDAD (Clostridium difficile-associated diarrhea); and a program to develop a therapy to treat respiratory syncitial virus (RSV) infection in collaboration with Alnylam Pharmaceuticals, Inc. Cubist is headquartered in Lexington, MA. Additional information can be found at Cubist's web site at www.cubist.com

Cubist and CUBICIN are registered trademarks of Cubist Pharmaceuticals, Inc.AstraZeneca and MERREM are registered trademarks of the AstraZeneca group of companies.


CUBIST PHARMACEUTICALS, INC.
CONDENSED CONSOLIDATED BALANCE SHEETS
UNAUDITED
(in thousands)
 
    December 31,   December 31,
    2008      2007
         
ASSETS        
Cash, cash equivalents and long-term investments   $   417,945   $   398,184
Accounts receivable, net   43,162   29,075
Inventory   21,958   18,733
Property and equipment, net   66,819   50,150
Deferred tax assets, net   127,792  
Other assets   38,916   38,373
         
Total assets   $   716,592   $   534,515
         
         
LIABILITIES AND STOCKHOLDERS' EQUITY        
Accounts payable and accrued expenses   $     79,584   $     65,299
Deferred revenue   21,340   17,816
Debt and other long-term liabilities   303,696   352,698
         
Total liabilities   404,620   435,813
         
         
Total stockholders' equity   311,972   98,702
         
         
Total liabilities and stockholders' equity   $   716,592   $   534,515
         
 
CUBIST PHARMACEUTICALS, INC.
CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS
UNAUDITED
(in thousands, except share and per share data)
 
        Three months ended     Twelve months ended  
        December 31,     December 31,  
                 
                   2008        2007        2008      2007  
Revenues:                      
  U.S. product revenues, net   $ 120,058     $ 83,875     $ 414,681   $ 285,059  
  International product revenues     2,167       1,245       7,400     5,347  
  Service revenues     8,033             9,451      
  Other revenues     897       461       2,109     4,214  
                           
    Total revenues, net     131,155       85,581       433,641     294,620  
                                   
Costs and expenses:                              
  Cost of product revenues     24,808       19,135       90,381     68,860  
  Research and development     30,484       34,270       126,670     85,175  
  Sales and marketing     20,604       18,653       84,997     67,662  
  General and administrative     9,409       7,493       40,704     31,485  
                           
    Total costs and expenses     85,305       79,551       342,752     253,182  
                                   
Operating income     45,850       6,030       90,889     41,438  
                           
Other income (expense), net     (48,884)       2,520       (44,986)     8,589  
                                   
                           
(Loss) income before income taxes     (3,034)       8,550       45,903     50,027  
                                   
(Benefit) provision for income taxes     (126,069)       517       (123,916)     1,880  
                                   
                           
Net income   $ 123,035     $ 8,033     $ 169,819   $ 48,147  
                           
Basic net income per common share   $ 2.15     $ 0.14     $ 3.00   $ 0.87  
Diluted net income per common share   $ 1.82 1   $ 0.14 1   $ 2.56 2 $ 0.83 1
                                   
Shares used in calculating:                              
  Basic net income per common share   57,202,892     56,070,144     56,645,962   55,591,775  
  Diluted net income per common share   68,320,590     57,758,867     67,955,061   68,822,996  
                                   
1 Includes add back of interest expense and debt issuance costs on 2.25% notes to income, net of tax effect
2 Includes add back of interest expense, debt issuance costs and net gain on repurchase of 2.25% notes to income, net of tax effect
 
CUBIST PHARMACEUTICALS, INC.
CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS - NON-GAAP
UNAUDITED
(in thousands, except share and per share data)
 
      Three months ended     Twelve months ended  
      December 31,     December 31,  
               
             2008        2007        2008      2007  
                         
GAAP net income   $ 123,035     $ 8,033     $ 169,819   $ 48,147  
                                 
Add back of tax benefit     (127,792)             (127,792)      
                                 
Other-than-temporary impairment of auction rate securities     49,178             49,178      
                                 
Stock-based compensation expense under SFAS 123(R)     2,967       2,643       11,831     10,539  
                                 
Ecallantide licensing fees                 17,500      
                                 
Write off of assets disposed of to build new lab space                 2,323      
                                 
IPR&D - Illumigen           15,148           15,148  
                                 
                         
Non-GAAP proforma net income   $ 47,388     $ 25,824     $ 122,859   $ 73,834  
                         
Non-GAAP basic net income per common share   $ 0.83     $ 0.46     $ 2.17   $ 1.33  
Non-GAAP diluted net income per common share   $ 0.71 1   $ 0.41 1   $ 1.86 2 $ 1.20 1
                                 
Shares used in calculating:                              
  Non-GAAP basic net income per common share   57,202,892     56,070,144     56,645,962   55,591,775  
  Non-GAAP diluted net income per common share   68,320,590     69,133,202     67,955,061   68,822,996  
                                 
1 Includes add back of interest expense and debt issuance costs on 2.25% notes to income, net of tax effect
2 Includes add back of interest expense, debt issuance costs and net gain on repurchase of 2.25% notes to income, net of tax effect
Source: Cubist Pharmaceuticals, Inc. Contact: Cubist Pharmaceuticals, Inc. Eileen C. McIntyre, 781-860-8533 Senior Director, Corporate Communications eileen.mcintyre@cubist.com or Weber Shandwick Tara Murphy, 617-520-7045 tmurphy@webershandwick.com